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BARCELONA SUPERCOMPUTING CENTER

Responsibilities: Project Coordination Development of the EUCANCan platform Management of the financial control regarding the European partners

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DEUTSCHES KREBSFORSCHUNGS- ZENTRUM HEIDELBERG

Responsibilities: Contribution to pipeline development and virtualization Contribution to benchmarking of pipelines Development of tools for annotation of somatic variants Contribution to the Heidelberg ICGC data portal

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ONTARIO INSTITUTE FOR CANCER RESEARCH

Responsibilities: Develop software for storing, indexing and querying genomic data collected by each EUCANCan node Develop a high-speed file transfer service for efficient exchange of clinical and genomic data files among EUCANCan nodes, accessible to authorized users Develop software to extract and uniformly annotate genomic variants identified by EUCANCan nodes

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CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE

Responsibilities: Exploration and testing of cloud infrastructures Contribution to the implementation of the pipelines for production environment Contribution to the non-clinical omics data integration Contribution to the project overall coordination and dissemination

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HARTWIG MEDICAL FOUNDATION

Responsibilities: Optimization and standardization comprehensive somatic variant calling pipelines Improvement of WGS-based therapeutic decision tools and reporting Facilitation of connection between the HMF metastatic cancer WGS resource to other resources for research

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FUNDACIO CENTRE DE REGULACIO GENOMICA

Responsibilities: To define a circuit for long-term raw data and metadata storage and flow, as well as access protocols To prepare global infrastructures and facilitate deployment of local infrastructures for the long-term storage and flow of raw data To synchronize connectivity and interoperability protocols to interact within EUCANCan system at the level of genomic variant […]

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EUROPEAN MOLECULAR BIOLOGY LABORATORY

Responsibilities: Deploy, refine and develop automated tools and annotation to filter and prioritise both germline and somatic alterations to support decision making in tumour boards Contribution to pipeline development including for cloud pipelines

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CONSORCI INSTITUT D’INVESTIGACIONS BIOMPEDIQUES AUGUST PI...

Responsibilities: Providing, sharing and screening of the ICGC data of Chronic lymphocytic leukaemia Contribution to the integration of clinical and genomic data Definition of the oncology essential data set for patient management decisions

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INSTITUT CATALÀ D’ONCOLOGIA

Responsibilities: Production of samples, mainly Colorectal (advanced and metastatic) Contribution to the identification of the best suited oncology minimal data set Adaptation and calibration tasks on local site

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